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Biochar Enhances the Abundance of Microbial Functional Genes Involve in C, N, P, and S Cycling

A Quantitative Metagenomic Insight From Paddy Soil

Bibliographic Data

ID21648843
AuthorsXiaoge Fan (Key Laboratory of Recycling and Eco‐Treatment of Waste Biomass of Zhejiang Province, School of Environmental and Natural Resources Zhejiang University of Science and Technology Hangzhou China), Xiang Cao (0000-0002-8813-9669, Key Laboratory of Recycling and Eco‐Treatment of Waste Biomass of Zhejiang Province, School of Environmental and Natural Resources Zhejiang University of Science and Technology Hangzhou China), Min Zhang (0000-0003-4273-6836, Key Laboratory of Recycling and Eco‐Treatment of Waste Biomass of Zhejiang Province, School of Environmental and Natural Resources Zhejiang University of Science and Technology Hangzhou China, corresponding author), Jianwu Jiang (0000-0001-9098-8347, Key Laboratory of Recycling and Eco‐Treatment of Waste Biomass of Zhejiang Province, School of Environmental and Natural Resources Zhejiang University of Science and Technology Hangzhou China), Caihua Li (Shanghai G&C Biotechnology Co. Ltd. Shanghai China), Fang Ou (0000-0002-5037-0857, Shanghai CASB Biotechnology (China)), Ou Fang (Shanghai G&C Biotechnology Co. Ltd. Shanghai China), Wenbing Wang (0000-0001-7131-4136, School of Environmental and Chemical Engineering Shanghai University Shanghai China), Jin Zhang (0000-0002-1374-598X, Key Laboratory of Recycling and Eco‐Treatment of Waste Biomass of Zhejiang Province, School of Environmental and Natural Resources Zhejiang University of Science and Technology Hangzhou China), Nicholas Clarke (0000-0002-2048-9785, Norwegian Institute of Bioeconomy Research Ås Norway), Wenbo Liu (0000-0003-2560-0777, Key Laboratory of Recycling and Eco‐Treatment of Waste Biomass of Zhejiang Province, School of Environmental and Natural Resources Zhejiang University of Science and Technology Hangzhou China, corresponding author), Shengdao Shan (Key Laboratory of Recycling and Eco‐Treatment of Waste Biomass of Zhejiang Province, School of Environmental and Natural Resources Zhejiang University of Science and Technology Hangzhou China)
Year2025
Volume36
Issue18
Pages6272-6283
Publication date2025-12-01
Peer ReviewedYes
Open AccessYes
TypeARTICLE
VenueLand Degradation and Development (JOURNAL)
Journal identifiersISSN: 1085-3278 • E-ISSN: 1099-145X
PublisherWiley (PUBLISHER • GB)
DOI10.1002/ldr.70067
OpenAlexW4412062111
LanguageEN
References cited59

Although biochar application is regarded as a promising agronomic strategy to enhance soil functions, research employing quantitative techniques to evaluate its influence on microbial functional genes specifically in paddy soils is still scarce. The objective of this study was to quantify the abundance of microbial functional genes associated with carbon (C), nitrogen (N), phosphorus (P), and sulfur (S) cycling over a 2‐year paddy field experiment after biochar application, employing a quantitative metagenomic sequencing with the spike‐in method. An increase in rice yield of 7.0% and 12.5% relative to the control was observed following biochar amendment over the 2 study years. The majority of soil microbial functional genes related to C, N, P, and S cycling exhibited higher abundances in soils amended with biochar. Notably, genes associated with the Wood‐Ljungdahl pathway, Calvin‐Benson‐Bassham cycle, and denitrification increased by 18.5%–197.4%, 25.9%–116.0%, and 5.1%–405.3% over 2 years. Gene responsible for P regulators increased approximately 10.5%–109.6%, while the assimilatory sulfate reduction process exhibited an increase of 12.7%–246.0%. Random forest highlighted key biogeochemical processes (e.g., C degradation, tricarboxylic acid cycle, and dissimilatory N reduction) as potential contributors to improving rice yields. Biochar amendment led to the formation of a more complex gene co‐occurrence network, as exposed by network analysis. Collectively, these findings underscore that biochar application may consequently enhance microbial functional capacity in paddy soils, fostering improved agroecosystem functions

Biochar · Biology · Computational biology · Cycling · Gene · Geography · Metagenomics · Chemistry · Microbial Community Ecology and Physiology · Phytase and its Applications · Soil Carbon and Nitrogen Dynamics · Ecology · Forestry · Genetics

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